{"id":121,"date":"2015-05-13T11:14:59","date_gmt":"2015-05-13T02:14:59","guid":{"rendered":"http:\/\/jphenome.info\/?page_id=121"},"modified":"2015-11-24T16:43:43","modified_gmt":"2015-11-24T07:43:43","slug":"arabidopsisdata","status":"publish","type":"page","link":"https:\/\/jphenome.info\/?page_id=121","title":{"rendered":"Related data information for Arabidopsis Phenome Database"},"content":{"rendered":"

Projects<\/a> > \u30b7\u30ed\u30a4\u30cc\u30ca\u30ba\u30ca\u30d5\u30a7\u30ce\u30fc\u30e0\u30c7\u30fc\u30bf\u30d9\u30fc\u30b9<\/a> > related information<\/p>\n

1. Ontologies:<\/strong><\/p>\n\n\n\n\n\n\n\n\n\n\n\n\n\n
Ontology<\/td>\nCovered field<\/td>\nExample<\/td>\nReference<\/td>\n<\/tr>\n<\/thead>\n
Plant Ontology (PO)<\/td>\norgan<\/td>\nflower<\/td>\nCooper et al<\/em>. 2013<\/a><\/td>\n<\/tr>\n
developmental stage<\/td>\nflowering<\/td>\n<\/tr>\n
Plant Trait Ontology (TO)<\/td>\ndevelopmental stage<\/td>\nflowering time<\/td>\nJaiswal et al<\/em>. 2002<\/a><\/td>\n<\/tr>\n
The ontology of phenotypic qualities (PATO)<\/td>\nphysical quality<\/td>\nincreased length<\/td>\nMungall et al<\/em>. 2010<\/a><\/td>\n<\/tr>\n
Gene Ontology (GO)<\/td>\nbiological process<\/td>\nnitrogen fixation<\/td>\nAshburner et al<\/em>. 2000<\/a><\/td>\n<\/tr>\n
cellular component<\/td>\nchloroplast<\/td>\n<\/tr>\n
molecular function<\/td>\nglycerate kinase activity<\/td>\n<\/tr>\n
Plant Environment Ontology (EO)<\/td>\nenvironmental condition<\/td>\nlong day length regimen<\/td>\nJaiswal et al<\/em>. 2002<\/a><\/td>\n<\/tr>\n
Chemical Entities of Biological Interest (ChEBI)<\/td>\nchemical compound<\/td>\nsugar<\/td>\nHastings et al<\/em>. 2013<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

2.\u00a0RIKEN Arabidopsis mutants<\/strong><\/p>\n\n\n\n\n\n\n\n
Project<\/td>\n# of mutants<\/td>\nReference<\/td>\n<\/tr>\n<\/thead>\n
RIKEN Activation tagging line<\/a><\/td>\n469<\/td>\nNakazawa et al<\/em>. 2003<\/a><\/td>\n<\/tr>\n
RIKEN Arabidopsis Fox-hunting<\/a><\/td>\n14125<\/td>\nKondou et al<\/em>. 2010<\/a><\/td>\n<\/tr>\n
RIKEN Ds transposon line<\/a><\/td>\n22211<\/td>\nSakurai et al<\/em>. 2005<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"

Projects > \u30b7\u30ed\u30a4\u30cc\u30ca\u30ba\u30ca\u30d5\u30a7\u30ce\u30fc\u30e0\u30c7\u30fc\u30bf\u30d9\u30fc\u30b9 > related information 1. Ontologies: Ontology Covered field Example Refere … “Related data information for Arabidopsis Phenome Database” \u306e<\/span>\u7d9a\u304d\u3092\u8aad\u3080<\/a><\/p>\n","protected":false},"author":3,"featured_media":0,"parent":95,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_seopress_robots_primary_cat":"","_seopress_titles_title":"","_seopress_titles_desc":"","_seopress_robots_index":"","_locale":"ja","_original_post":"122","footnotes":""},"class_list":["post-121","page","type-page","status-publish","hentry","ja"],"_links":{"self":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages\/121","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/jphenome.info\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=121"}],"version-history":[{"count":7,"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages\/121\/revisions"}],"predecessor-version":[{"id":736,"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages\/121\/revisions\/736"}],"up":[{"embeddable":true,"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages\/95"}],"wp:attachment":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=121"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}