{"id":680,"date":"2015-11-18T16:16:06","date_gmt":"2015-11-18T07:16:06","guid":{"rendered":"http:\/\/jphenome.info\/?page_id=680"},"modified":"2023-08-03T14:23:27","modified_gmt":"2023-08-03T05:23:27","slug":"project","status":"publish","type":"page","link":"https:\/\/jphenome.info\/?page_id=680&lang=en-US","title":{"rendered":"Project"},"content":{"rendered":"
\n
\n

\n <\/i> Browsing Phenotype data
\n <\/i> Download all Phenotype data
\n <\/i>Query with SPARQL\n <\/p>\n<\/p><\/div>\n<\/div>\n

\"Animal
Animal Phenotype<\/h3>\n
\n

<\/i> IMPC RDF data<\/strong><\/a> <\/i><\/a> <\/i><\/a> <\/i><\/a>
\nRDF version data produced from International Mouse Phenotyping Consortium (IMPC). All data produced from IMPC: phenotype calls, p-values, statistical raw data, materials and procedures are involved.<\/p>\n

<\/i> Metadata of BRC mouse resources and phenotypes<\/strong><\/a>
\nA RDF-based meta-database of mouse strains and phenotypes used in biological and medical researches as bioresources. Data compornents of phenotype, gene and mutated alleles are linked public databases and ontologies. Mouse strains are available from RIKEN BioResource Center<\/p>\n

<\/i> Metadata of Functional Glycomics with KO mice database<\/strong><\/a>
\nRDF based mata-database of \u201cFunctional Glycomics with KO mice database\u201d in Japan Consortium for Glycobiology and Glycotechnology DataBase\uff08JCGGDB\uff09.<\/p>\n

<\/i> Metadata of NBRP Medaka and phenotypes<\/strong><\/a>
\nA RDF-based meta-database of NBRP medaka strains and phenotypes (https:\/\/www.shigen.nig.ac.jp\/medaka\/)used various bio- and medical researches as bioresources. Data compornents of phenotype, gene and mutated alleles are linked public databases and ontologies. Medaka strains are available from NBRP medaka project.<\/p>\n

\u30fbMetadata of NBRP Rats
\n<\/strong><\/a>RDF-based metadata of NBRP Rat Phenotype Database (http:\/\/www.anim.med.kyoto-u.ac.jp\/nbr\/Default.aspx<\/a>).<\/p>\n

\u30fbMetadata of MSM-B6 Consomic Mice and phenotypes
\n<\/strong>RDF-based metadata from NIG Mouse Phenotype Database (http:\/\/molossinus.lab.nig.ac.jp\/phenotype\/index.html<\/a>).<\/p>\n

<\/span><\/p>\n

\u30fbJapan Cre Resource and Expression Database (beta)<\/strong><\/p>\n

<\/i> Metadata of BRC cell resources and phenotypes (beta)<\/strong><\/a> <\/i><\/a> <\/i><\/a><\/i><\/a>
\nA RDF-based meta-database of cell lines derived from multiple species and cell types used in biological and medical researches as bioresources. Cell lines are available from RIKEN BioResource Center.<\/p>\n

<\/i> The RIKEN integrated database of mammals<\/strong><\/a> <\/i><\/a><\/i><\/a><\/p>\n

\u30fbJ-phenome.animal<\/strong><\/p>\n<\/div>\n

\"Plant
Plant Phenotype<\/h3>\n
\n

<\/i> Arabidopsis Phenome Database<\/strong><\/a>
\nThe Arabidopsis thaliana phenome is the whole set of characteristics expressedin response to genomic, environmental and experimental factors of the mostmajor experimental plant. \u201cRIKEN PhenomeIntegration of Arabidopsis Mutants\u201d, allows researchers to search mutants. The \u201cDatabase of Curated Plant Phenome\u201d focusingon the Arabidopsis phenome collectedby human curation of published papers, is designed to realize easily both phenotype-to-genomeand genome-to-phenotype association studies.<\/p>\n<\/div>\n

\"Microbe
Microbe Phenotype<\/h3>\n
\n

<\/i> Metadata of JCM resources and phenotypes (beta)<\/strong><\/a> <\/i><\/a><\/i><\/a>
\nA RDF-based meta-database of microbial strains used in various researches such as biology, environment and human health as bioresources. Microbial strains are available from Japan Collection of Microorganisms (JCM) in RIKEN BioResource Center.<\/p>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

Browsing Phenotype data Download all Phenotype data Query with SPARQL Animal Phenotype IMPC RDF data RDF versi … “Project” \u306e<\/span>\u7d9a\u304d\u3092\u8aad\u3080<\/a><\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_seopress_robots_primary_cat":"","_seopress_titles_title":"","_seopress_titles_desc":"","_seopress_robots_index":"","_locale":"en_US","_original_post":"646","footnotes":""},"class_list":["post-680","page","type-page","status-publish","hentry","en-US"],"_links":{"self":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages\/680","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/jphenome.info\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=680"}],"version-history":[{"count":19,"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages\/680\/revisions"}],"predecessor-version":[{"id":1379,"href":"https:\/\/jphenome.info\/index.php?rest_route=\/wp\/v2\/pages\/680\/revisions\/1379"}],"wp:attachment":[{"href":"https:\/\/jphenome.info\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=680"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}