Project

IMPC RDF data
RDF version data produced from International Mouse Phenotyping Consortium (IMPC). All data produced from IMPC: phenotype calls, p-values, statistical raw data, materials and procedures are involved.

Metadata of BRC mouse resources and phenotypes
A RDF-based meta-database of mouse strains and phenotypes used in biological and medical researches as bioresources. Data compornents of phenotype, gene and mutated alleles are linked public databases and ontologies. Mouse strains are available from RIKEN BioResource Center

Metadata of Functional Glycomics with KO mice database
RDF based mata-database of “Functional Glycomics with KO mice database” in Japan Consortium for Glycobiology and Glycotechnology DataBase（JCGGDB）.

Metadata of NBRP Medaka and phenotypes
A RDF-based meta-database of NBRP medaka strains and phenotypes (https://www.shigen.nig.ac.jp/medaka/)used various bio- and medical researches as bioresources. Data compornents of phenotype, gene and mutated alleles are linked public databases and ontologies. Medaka strains are available from NBRP medaka project.

・Metadata of NBRP Rats
RDF-based metadata of NBRP Rat Phenotype Database (http://www.anim.med.kyoto-u.ac.jp/nbr/Default.aspx).

・Metadata of MSM-B6 Consomic Mice and phenotypes
RDF-based metadata from NIG Mouse Phenotype Database (http://molossinus.lab.nig.ac.jp/phenotype/index.html).

・Japan Cre Resource and Expression Database (beta)

Metadata of BRC cell resources and phenotypes (beta)
A RDF-based meta-database of cell lines derived from multiple species and cell types used in biological and medical researches as bioresources. Cell lines are available from RIKEN BioResource Center.

The RIKEN integrated database of mammals

・J-phenome.animal

Arabidopsis Phenome Database
The Arabidopsis thaliana phenome is the whole set of characteristics expressedin response to genomic, environmental and experimental factors of the mostmajor experimental plant. “RIKEN PhenomeIntegration of Arabidopsis Mutants”, allows researchers to search mutants. The “Database of Curated Plant Phenome” focusingon the Arabidopsis phenome collectedby human curation of published papers, is designed to realize easily both phenotype-to-genomeand genome-to-phenotype association studies.

Metadata of JCM resources and phenotypes (beta)
A RDF-based meta-database of microbial strains used in various researches such as biology, environment and human health as bioresources. Microbial strains are available from Japan Collection of Microorganisms (JCM) in RIKEN BioResource Center.